Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ndc1Q8VCB1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc1Q8VCB1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.45■□□□□ 0.86
Ndc1Q8VCB1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndc1Q8VCB1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.45■□□□□ 0.86
Ndc1Q8VCB1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.45■□□□□ 0.86
Ndc1Q8VCB1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndc1Q8VCB1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
Ndc1Q8VCB1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc1Q8VCB1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc1Q8VCB1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ndc1Q8VCB1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc1Q8VCB1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ndc1Q8VCB1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc1Q8VCB1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc1Q8VCB1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ndc1Q8VCB1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.4■□□□□ 0.86
Ndc1Q8VCB1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndc1Q8VCB1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndc1Q8VCB1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Ndc1Q8VCB1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndc1Q8VCB1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ndc1Q8VCB1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ndc1Q8VCB1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.39■□□□□ 0.85
Ndc1Q8VCB1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ndc1Q8VCB1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ndc1Q8VCB1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ndc1Q8VCB1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ndc1Q8VCB1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ndc1Q8VCB1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ndc1Q8VCB1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ndc1Q8VCB1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ndc1Q8VCB1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Ndc1Q8VCB1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ndc1Q8VCB1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndc1Q8VCB1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ndc1Q8VCB1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.33■□□□□ 0.85
Ndc1Q8VCB1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ndc1Q8VCB1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ndc1Q8VCB1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms