Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc5Q8CG46 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Smc5Q8CG46 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc5Q8CG46 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Smc5Q8CG46 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.14■■□□□ 1.94
Smc5Q8CG46 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Smc5Q8CG46 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Smc5Q8CG46 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Smc5Q8CG46 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Smc5Q8CG46 Gm37415-201ENSMUST00000192265 2054 ntBASIC27.13■■□□□ 1.93
Smc5Q8CG46 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC27.13■■□□□ 1.93
Smc5Q8CG46 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Smc5Q8CG46 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Smc5Q8CG46 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.12■■□□□ 1.93
Smc5Q8CG46 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Smc5Q8CG46 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smc5Q8CG46 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Smc5Q8CG46 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Smc5Q8CG46 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC27.09■■□□□ 1.93
Smc5Q8CG46 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.09■■□□□ 1.93
Smc5Q8CG46 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC27.09■■□□□ 1.93
Smc5Q8CG46 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Smc5Q8CG46 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.08■■□□□ 1.93
Smc5Q8CG46 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.08■■□□□ 1.93
Smc5Q8CG46 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Smc5Q8CG46 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc5Q8CG46 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC27.06■■□□□ 1.92
Smc5Q8CG46 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Smc5Q8CG46 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Smc5Q8CG46 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC27.06■■□□□ 1.92
Smc5Q8CG46 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Smc5Q8CG46 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Smc5Q8CG46 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Smc5Q8CG46 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Smc5Q8CG46 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Smc5Q8CG46 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
Smc5Q8CG46 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Smc5Q8CG46 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC27.01■■□□□ 1.91
Smc5Q8CG46 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc5Q8CG46 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27■■□□□ 1.91
Smc5Q8CG46 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27■■□□□ 1.91
Smc5Q8CG46 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Smc5Q8CG46 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Smc5Q8CG46 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC27■■□□□ 1.91
Smc5Q8CG46 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc5Q8CG46 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
Smc5Q8CG46 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc5Q8CG46 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Smc5Q8CG46 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Smc5Q8CG46 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.97■■□□□ 1.91
Smc5Q8CG46 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Smc5Q8CG46 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Smc5Q8CG46 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Smc5Q8CG46 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Smc5Q8CG46 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Smc5Q8CG46 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.95■■□□□ 1.9
Smc5Q8CG46 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.95■■□□□ 1.9
Smc5Q8CG46 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smc5Q8CG46 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
Smc5Q8CG46 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc5Q8CG46 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smc5Q8CG46 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.92■■□□□ 1.9
Smc5Q8CG46 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smc5Q8CG46 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.92■■□□□ 1.9
Smc5Q8CG46 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smc5Q8CG46 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms