Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Sfr1Q8BP27 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sfr1Q8BP27 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.02■■□□□ 1.12
Sfr1Q8BP27 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sfr1Q8BP27 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sfr1Q8BP27 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sfr1Q8BP27 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sfr1Q8BP27 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sfr1Q8BP27 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sfr1Q8BP27 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Sfr1Q8BP27 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sfr1Q8BP27 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sfr1Q8BP27 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sfr1Q8BP27 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sfr1Q8BP27 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
Sfr1Q8BP27 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sfr1Q8BP27 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sfr1Q8BP27 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sfr1Q8BP27 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sfr1Q8BP27 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sfr1Q8BP27 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.96■■□□□ 1.11
Sfr1Q8BP27 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sfr1Q8BP27 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Sfr1Q8BP27 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sfr1Q8BP27 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sfr1Q8BP27 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Gm22567-201ENSMUST00000175542 342 ntBASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sfr1Q8BP27 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sfr1Q8BP27 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.89■■□□□ 1.1
Sfr1Q8BP27 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sfr1Q8BP27 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Gm5921-201ENSMUST00000075898 882 ntBASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sfr1Q8BP27 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.88■■□□□ 1.09
Sfr1Q8BP27 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms