Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh19Q80TF3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh19Q80TF3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh19Q80TF3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdh19Q80TF3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh19Q80TF3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh19Q80TF3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh19Q80TF3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh19Q80TF3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh19Q80TF3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh19Q80TF3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh19Q80TF3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdh19Q80TF3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh19Q80TF3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdh19Q80TF3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.32■■□□□ 1
Pcdh19Q80TF3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh19Q80TF3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.31■■□□□ 1
Pcdh19Q80TF3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.31■■□□□ 1
Pcdh19Q80TF3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.31■■□□□ 1
Pcdh19Q80TF3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdh19Q80TF3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.31■■□□□ 1
Pcdh19Q80TF3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdh19Q80TF3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh19Q80TF3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdh19Q80TF3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.3■■□□□ 1
Pcdh19Q80TF3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.3■■□□□ 1
Pcdh19Q80TF3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdh19Q80TF3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh19Q80TF3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdh19Q80TF3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh19Q80TF3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdh19Q80TF3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.29■■□□□ 1
Pcdh19Q80TF3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh19Q80TF3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh19Q80TF3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh19Q80TF3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh19Q80TF3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh19Q80TF3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh19Q80TF3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh19Q80TF3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh19Q80TF3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Rps24-207ENSMUST00000224568 714 ntBASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.26■□□□□ 0.99
Pcdh19Q80TF3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdh19Q80TF3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh19Q80TF3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh19Q80TF3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh19Q80TF3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms