Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sdc3Q64519 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc3Q64519 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.8■□□□□ 0.92
Sdc3Q64519 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc3Q64519 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sdc3Q64519 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sdc3Q64519 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc3Q64519 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc3Q64519 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc3Q64519 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sdc3Q64519 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc3Q64519 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc3Q64519 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc3Q64519 Gm13238-201ENSMUST00000117655 780 ntBASIC20.77■□□□□ 0.92
Sdc3Q64519 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sdc3Q64519 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sdc3Q64519 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc3Q64519 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc3Q64519 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.75■□□□□ 0.91
Sdc3Q64519 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc3Q64519 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc3Q64519 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.75■□□□□ 0.91
Sdc3Q64519 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc3Q64519 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc3Q64519 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.74■□□□□ 0.91
Sdc3Q64519 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc3Q64519 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc3Q64519 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.74■□□□□ 0.91
Sdc3Q64519 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc3Q64519 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc3Q64519 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.74■□□□□ 0.91
Sdc3Q64519 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc3Q64519 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc3Q64519 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.73■□□□□ 0.91
Sdc3Q64519 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.73■□□□□ 0.91
Sdc3Q64519 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc3Q64519 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc3Q64519 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc3Q64519 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc3Q64519 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Sdc3Q64519 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sdc3Q64519 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc3Q64519 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sdc3Q64519 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc3Q64519 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc3Q64519 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc3Q64519 Gm5812-201ENSMUST00000061073 957 ntBASIC20.71■□□□□ 0.91
Sdc3Q64519 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc3Q64519 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc3Q64519 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc3Q64519 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.7■□□□□ 0.9
Sdc3Q64519 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
Sdc3Q64519 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.7■□□□□ 0.9
Sdc3Q64519 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.7■□□□□ 0.9
Sdc3Q64519 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sdc3Q64519 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
Sdc3Q64519 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc3Q64519 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sdc3Q64519 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc3Q64519 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc3Q64519 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.69■□□□□ 0.9
Sdc3Q64519 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc3Q64519 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc3Q64519 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Sdc3Q64519 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Sdc3Q64519 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
Sdc3Q64519 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sdc3Q64519 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc3Q64519 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sdc3Q64519 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.67■□□□□ 0.9
Sdc3Q64519 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sdc3Q64519 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sdc3Q64519 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sdc3Q64519 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc3Q64519 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms