Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sema3bQ62177 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.65■□□□□ 0.9
Sema3bQ62177 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.65■□□□□ 0.9
Sema3bQ62177 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3bQ62177 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema3bQ62177 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema3bQ62177 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.64■□□□□ 0.9
Sema3bQ62177 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sema3bQ62177 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3bQ62177 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3bQ62177 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3bQ62177 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3bQ62177 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Sema3bQ62177 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.63■□□□□ 0.89
Sema3bQ62177 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3bQ62177 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3bQ62177 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sema3bQ62177 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.63■□□□□ 0.89
Sema3bQ62177 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3bQ62177 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.62■□□□□ 0.89
Sema3bQ62177 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3bQ62177 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sema3bQ62177 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.61■□□□□ 0.89
Sema3bQ62177 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.61■□□□□ 0.89
Sema3bQ62177 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.61■□□□□ 0.89
Sema3bQ62177 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3bQ62177 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3bQ62177 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3bQ62177 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3bQ62177 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3bQ62177 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3bQ62177 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.59■□□□□ 0.89
Sema3bQ62177 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.59■□□□□ 0.89
Sema3bQ62177 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3bQ62177 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sema3bQ62177 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.89
Sema3bQ62177 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Sema3bQ62177 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3bQ62177 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3bQ62177 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3bQ62177 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.58■□□□□ 0.89
Sema3bQ62177 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3bQ62177 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sema3bQ62177 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sema3bQ62177 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sema3bQ62177 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.57■□□□□ 0.88
Sema3bQ62177 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Sema3bQ62177 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Gm13241-201ENSMUST00000094493 780 ntBASIC20.57■□□□□ 0.88
Sema3bQ62177 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3bQ62177 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.56■□□□□ 0.88
Sema3bQ62177 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.56■□□□□ 0.88
Sema3bQ62177 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3bQ62177 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sema3bQ62177 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.54■□□□□ 0.88
Sema3bQ62177 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sema3bQ62177 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sema3bQ62177 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3bQ62177 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sema3bQ62177 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sema3bQ62177 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sema3bQ62177 Serp2-204ENSMUST00000228055 705 ntBASIC20.53■□□□□ 0.88
Sema3bQ62177 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3bQ62177 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
Sema3bQ62177 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3bQ62177 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms