Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.42■■□□□ 1.98
Ubr3Q5U430 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.42■■□□□ 1.98
Ubr3Q5U430 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ubr3Q5U430 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.42■■□□□ 1.98
Ubr3Q5U430 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.42■■□□□ 1.98
Ubr3Q5U430 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ubr3Q5U430 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr3Q5U430 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr3Q5U430 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC27.4■■□□□ 1.98
Ubr3Q5U430 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr3Q5U430 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Ubr3Q5U430 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr3Q5U430 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr3Q5U430 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr3Q5U430 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr3Q5U430 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr3Q5U430 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr3Q5U430 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.39■■□□□ 1.98
Ubr3Q5U430 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ubr3Q5U430 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Ubr3Q5U430 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC27.38■■□□□ 1.97
Ubr3Q5U430 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ubr3Q5U430 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr3Q5U430 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Ubr3Q5U430 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr3Q5U430 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC27.37■■□□□ 1.97
Ubr3Q5U430 Gm45417-201ENSMUST00000209533 758 ntBASIC27.37■■□□□ 1.97
Ubr3Q5U430 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr3Q5U430 AC140930.3-201ENSMUST00000222935 274 ntBASIC27.36■■□□□ 1.97
Ubr3Q5U430 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr3Q5U430 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr3Q5U430 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr3Q5U430 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr3Q5U430 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr3Q5U430 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr3Q5U430 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC27.35■■□□□ 1.97
Ubr3Q5U430 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr3Q5U430 Gm10399-202ENSMUST00000202768 748 ntBASIC27.35■■□□□ 1.97
Ubr3Q5U430 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr3Q5U430 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr3Q5U430 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Ubr3Q5U430 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr3Q5U430 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC27.34■■□□□ 1.97
Ubr3Q5U430 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr3Q5U430 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr3Q5U430 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr3Q5U430 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.33■■□□□ 1.97
Ubr3Q5U430 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr3Q5U430 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr3Q5U430 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ubr3Q5U430 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
Ubr3Q5U430 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.32■■□□□ 1.96
Ubr3Q5U430 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ubr3Q5U430 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ubr3Q5U430 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.31■■□□□ 1.96
Ubr3Q5U430 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubr3Q5U430 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubr3Q5U430 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.3■■□□□ 1.96
Ubr3Q5U430 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubr3Q5U430 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubr3Q5U430 AC117245.4-201ENSMUST00000217388 1646 ntBASIC27.29■■□□□ 1.96
Ubr3Q5U430 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr3Q5U430 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27.28■■□□□ 1.96
Ubr3Q5U430 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr3Q5U430 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Ubr3Q5U430 Gm11847-201ENSMUST00000125165 1119 ntBASIC27.27■■□□□ 1.96
Ubr3Q5U430 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ubr3Q5U430 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
Ubr3Q5U430 Gm12821-201ENSMUST00000120022 600 ntBASIC27.27■■□□□ 1.96
Ubr3Q5U430 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
Ubr3Q5U430 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Ubr3Q5U430 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Ubr3Q5U430 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ubr3Q5U430 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Ubr3Q5U430 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ubr3Q5U430 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ubr3Q5U430 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ubr3Q5U430 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.25■■□□□ 1.95
Ubr3Q5U430 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ubr3Q5U430 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ubr3Q5U430 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr3Q5U430 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr3Q5U430 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ubr3Q5U430 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Ubr3Q5U430 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr3Q5U430 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr3Q5U430 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Ubr3Q5U430 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ubr3Q5U430 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubr3Q5U430 Gm8093-201ENSMUST00000128935 1892 ntBASIC27.21■■□□□ 1.95
Ubr3Q5U430 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ubr3Q5U430 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ubr3Q5U430 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ubr3Q5U430 Golgb1-201ENSMUST00000023534 498 ntBASIC27.21■■□□□ 1.95
Ubr3Q5U430 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ubr3Q5U430 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ubr3Q5U430 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ubr3Q5U430 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr3Q5U430 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ubr3Q5U430 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms