Protein–RNA interactions for Protein: Q02199

NUP49, Nucleoporin NUP49/NSP49, yeastyeast

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP49Q02199 ILV1YER086W 1731 nt5.67□□□□□ -1.5
NUP49Q02199 RIX7YLL034C 2514 nt5.67□□□□□ -1.5
NUP49Q02199 HIR1YBL008W 2523 nt5.66□□□□□ -1.5
NUP49Q02199 SHO1YER118C 1104 nt5.66□□□□□ -1.5
NUP49Q02199 FPR3YML074C 1236 nt5.66□□□□□ -1.5
NUP49Q02199 RPS3YNL178W 723 nt5.66□□□□□ -1.5
NUP49Q02199 BZZ1YHR114W 1902 nt5.66□□□□□ -1.5
NUP49Q02199 ALT2YDR111C 1524 nt5.65□□□□□ -1.5
NUP49Q02199 ALD6YPL061W 1503 nt5.64□□□□□ -1.51
NUP49Q02199 SUP2tY(GUA)D 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP11tY(GUA)F1 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP6tY(GUA)F2 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP7tY(GUA)J1 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP4tY(GUA)J2 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP5tY(GUA)M1 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP8tY(GUA)M2 75 nt5.64□□□□□ -1.51
NUP49Q02199 SUP3tY(GUA)O 75 nt5.64□□□□□ -1.51
NUP49Q02199 RPL10YLR075W 666 nt5.64□□□□□ -1.51
NUP49Q02199 YOR111WYOR111W 699 nt5.64□□□□□ -1.51
NUP49Q02199 KKQ8YKL168C 2175 nt5.64□□□□□ -1.51
NUP49Q02199 FRS2YFL022C 1512 nt5.64□□□□□ -1.51
NUP49Q02199 SGF29YCL010C 780 nt5.63□□□□□ -1.51
NUP49Q02199 JIP4YDR475C 2631 nt5.63□□□□□ -1.51
NUP49Q02199 WHI2YOR043W 1461 nt5.63□□□□□ -1.51
NUP49Q02199 GAT1YFL021W 1533 nt5.63□□□□□ -1.51
NUP49Q02199 BCY1YIL033C 1251 nt5.62□□□□□ -1.51
NUP49Q02199 YKL153WYKL153W 510 nt5.62□□□□□ -1.51
NUP49Q02199 CIT3YPR001W 1461 nt5.62□□□□□ -1.51
NUP49Q02199 IRS4YKR019C 1848 nt5.62□□□□□ -1.51
NUP49Q02199 POX1YGL205W 2247 nt5.62□□□□□ -1.51
NUP49Q02199 IMG1YCR046C 510 nt5.61□□□□□ -1.51
NUP49Q02199 tR(ACG)DtR(ACG)D 73 nt5.61□□□□□ -1.51
NUP49Q02199 tR(ACG)EtR(ACG)E 73 nt5.61□□□□□ -1.51
NUP49Q02199 tR(ACG)KtR(ACG)K 73 nt5.61□□□□□ -1.51
NUP49Q02199 tR(ACG)LtR(ACG)L 73 nt5.61□□□□□ -1.51
NUP49Q02199 tR(ACG)OtR(ACG)O 73 nt5.61□□□□□ -1.51
NUP49Q02199 TAL1YLR354C 1008 nt5.61□□□□□ -1.51
NUP49Q02199 YBR027CYBR027C 333 nt5.61□□□□□ -1.51
NUP49Q02199 GUA1YMR217W 1578 nt5.6□□□□□ -1.51
NUP49Q02199 AIM20YIL158W 615 nt5.6□□□□□ -1.51
NUP49Q02199 YJR084WYJR084W 1272 nt5.6□□□□□ -1.51
NUP49Q02199 YNR040WYNR040W 771 nt5.6□□□□□ -1.51
NUP49Q02199 YOL131WYOL131W 327 nt5.6□□□□□ -1.51
NUP49Q02199 YBR226CYBR226C 411 nt5.6□□□□□ -1.51
NUP49Q02199 YLL067CYLL067C 3618 nt5.59□□□□□ -1.51
NUP49Q02199 UIP5YKR044W 1332 nt5.59□□□□□ -1.51
NUP49Q02199 HST3YOR025W 1344 nt5.59□□□□□ -1.51
NUP49Q02199 CUP2YGL166W 678 nt5.59□□□□□ -1.51
NUP49Q02199 YLR361C-AYLR361C-A 297 nt5.59□□□□□ -1.51
NUP49Q02199 PYC1YGL062W 3537 nt5.59□□□□□ -1.51
NUP49Q02199 ZWF1YNL241C 1518 nt5.58□□□□□ -1.52
NUP49Q02199 XBP1YIL101C 1944 nt5.58□□□□□ -1.52
NUP49Q02199 RAD3YER171W 2337 nt5.58□□□□□ -1.52
NUP49Q02199 RAD59YDL059C 717 nt5.58□□□□□ -1.52
NUP49Q02199 YHR218W-AYHR218W-A 318 nt5.58□□□□□ -1.52
NUP49Q02199 GLC8YMR311C 690 nt5.58□□□□□ -1.52
NUP49Q02199 YBL112CYBL112C 318 nt5.58□□□□□ -1.52
NUP49Q02199 FSF1YOR271C 984 nt5.58□□□□□ -1.52
NUP49Q02199 LDB19YOR322C 2457 nt5.58□□□□□ -1.52
NUP49Q02199 EMW1YNL313C 2715 nt5.58□□□□□ -1.52
NUP49Q02199 YMR279CYMR279C 1623 nt5.57□□□□□ -1.52
NUP49Q02199 YDR187CYDR187C 519 nt5.57□□□□□ -1.52
NUP49Q02199 YMR252CYMR252C 405 nt5.57□□□□□ -1.52
NUP49Q02199 SCS22YBL091C-A 528 nt5.57□□□□□ -1.52
NUP49Q02199 RRS1YOR294W 612 nt5.57□□□□□ -1.52
NUP49Q02199 MSS1YMR023C 1581 nt5.56□□□□□ -1.52
NUP49Q02199 RRP46YGR095C 672 nt5.56□□□□□ -1.52
NUP49Q02199 TSA1YML028W 591 nt5.56□□□□□ -1.52
NUP49Q02199 YHM2YMR241W 945 nt5.56□□□□□ -1.52
NUP49Q02199 TAE1YBR261C 699 nt5.56□□□□□ -1.52
NUP49Q02199 YEL020CYEL020C 1683 nt5.56□□□□□ -1.52
NUP49Q02199 GAA1YLR088W 1845 nt5.55□□□□□ -1.52
NUP49Q02199 CHO1YER026C 831 nt5.55□□□□□ -1.52
NUP49Q02199 ECM14YHR132C 1293 nt5.55□□□□□ -1.52
NUP49Q02199 YIL077CYIL077C 963 nt5.55□□□□□ -1.52
NUP49Q02199 HSP150YJL159W 1242 nt5.55□□□□□ -1.52
NUP49Q02199 PSR2YLR019W 1194 nt5.55□□□□□ -1.52
NUP49Q02199 TNA1YGR260W 1605 nt5.55□□□□□ -1.52
NUP49Q02199 SFB3YHR098C 2790 nt5.55□□□□□ -1.52
NUP49Q02199 SAC6YDR129C 1929 nt5.54□□□□□ -1.52
NUP49Q02199 HSP78YDR258C 2436 nt5.54□□□□□ -1.52
NUP49Q02199 SDH4YDR178W 546 nt5.54□□□□□ -1.52
NUP49Q02199 YJU3YKL094W 942 nt5.54□□□□□ -1.52
NUP49Q02199 SKN1YGR143W 2316 nt5.54□□□□□ -1.52
NUP49Q02199 QNS1YHR074W 2145 nt5.54□□□□□ -1.52
NUP49Q02199 YFL052WYFL052W 1398 nt5.54□□□□□ -1.52
NUP49Q02199 ATP1YBL099W 1638 nt5.53□□□□□ -1.52
NUP49Q02199 MCM6YGL201C 3054 nt5.53□□□□□ -1.52
NUP49Q02199 CDC34YDR054C 888 nt5.53□□□□□ -1.52
NUP49Q02199 PMP3YDR276C 168 nt5.53□□□□□ -1.52
NUP49Q02199 YEL068CYEL068C 333 nt5.53□□□□□ -1.52
NUP49Q02199 YEH1YLL012W 1722 nt5.53□□□□□ -1.52
NUP49Q02199 MCM3YEL032W 2916 nt5.53□□□□□ -1.52
NUP49Q02199 EPS1YIL005W 2106 nt5.53□□□□□ -1.52
NUP49Q02199 LSG1YGL099W 1923 nt5.52□□□□□ -1.53
NUP49Q02199 CDC1YDR182W 1476 nt5.52□□□□□ -1.53
NUP49Q02199 OSW2YLR054C 2175 nt5.52□□□□□ -1.53
NUP49Q02199 VPS70YJR126C 2436 nt5.52□□□□□ -1.53
NUP49Q02199 YER148W-AYER148W-A 579 nt5.52□□□□□ -1.53
NUP49Q02199 HAP2YGL237C 798 nt5.52□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms