Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CntfP51642 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CntfP51642 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CntfP51642 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CntfP51642 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CntfP51642 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.37■□□□□ 0.85
CntfP51642 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CntfP51642 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.36■□□□□ 0.85
CntfP51642 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CntfP51642 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CntfP51642 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CntfP51642 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CntfP51642 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
CntfP51642 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CntfP51642 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CntfP51642 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CntfP51642 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CntfP51642 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CntfP51642 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.35■□□□□ 0.85
CntfP51642 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CntfP51642 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CntfP51642 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CntfP51642 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.34■□□□□ 0.85
CntfP51642 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.34■□□□□ 0.85
CntfP51642 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CntfP51642 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CntfP51642 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CntfP51642 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CntfP51642 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CntfP51642 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CntfP51642 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CntfP51642 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CntfP51642 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.32■□□□□ 0.84
CntfP51642 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CntfP51642 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CntfP51642 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CntfP51642 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CntfP51642 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CntfP51642 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CntfP51642 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CntfP51642 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CntfP51642 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CntfP51642 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CntfP51642 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CntfP51642 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CntfP51642 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CntfP51642 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CntfP51642 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CntfP51642 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CntfP51642 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.28■□□□□ 0.84
CntfP51642 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.28■□□□□ 0.84
CntfP51642 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CntfP51642 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.27■□□□□ 0.84
CntfP51642 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CntfP51642 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CntfP51642 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CntfP51642 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.26■□□□□ 0.83
CntfP51642 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CntfP51642 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CntfP51642 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CntfP51642 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CntfP51642 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CntfP51642 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CntfP51642 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CntfP51642 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.25■□□□□ 0.83
CntfP51642 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CntfP51642 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CntfP51642 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CntfP51642 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.25■□□□□ 0.83
CntfP51642 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CntfP51642 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.25■□□□□ 0.83
CntfP51642 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CntfP51642 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.24■□□□□ 0.83
CntfP51642 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CntfP51642 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CntfP51642 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.23■□□□□ 0.83
CntfP51642 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CntfP51642 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CntfP51642 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CntfP51642 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CntfP51642 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CntfP51642 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.22■□□□□ 0.83
CntfP51642 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms