Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav4-4-dv10A0A075B651 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav4-4-dv10A0A075B651 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.96■□□□□ 0.3
Trav4-4-dv10A0A075B651 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Mir3960-201ENSMUST00000198213 73 ntBASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.95■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Trav4-4-dv10A0A075B651 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav4-4-dv10A0A075B651 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4-4-dv10A0A075B651 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gm8503-201ENSMUST00000118131 455 ntBASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav4-4-dv10A0A075B651 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav4-4-dv10A0A075B651 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav4-4-dv10A0A075B651 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-4-dv10A0A075B651 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-4-dv10A0A075B651 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.87■□□□□ 0.29
Trav4-4-dv10A0A075B651 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav4-4-dv10A0A075B651 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm45364-201ENSMUST00000210883 159 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms