Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Iqck-206ENSMUST00000208658 2891 ntBASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8-1A0A075B641 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8-1A0A075B641 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8-1A0A075B641 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8-1A0A075B641 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.54■□□□□ 0.08
Trav8-1A0A075B641 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8-1A0A075B641 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8-1A0A075B641 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav8-1A0A075B641 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8-1A0A075B641 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8-1A0A075B641 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav8-1A0A075B641 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8-1A0A075B641 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8-1A0A075B641 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8-1A0A075B641 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8-1A0A075B641 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8-1A0A075B641 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.5■□□□□ 0.07
Trav8-1A0A075B641 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8-1A0A075B641 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8-1A0A075B641 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8-1A0A075B641 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8-1A0A075B641 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Trav8-1A0A075B641 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav8-1A0A075B641 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8-1A0A075B641 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8-1A0A075B641 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav8-1A0A075B641 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav8-1A0A075B641 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8-1A0A075B641 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8-1A0A075B641 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms