Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lima1Q9ERG0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lima1Q9ERG0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm15427-201ENSMUST00000117288 531 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lima1Q9ERG0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Gm14494-201ENSMUST00000118786 435 ntBASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lima1Q9ERG0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms