Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mir6990-201ENSMUST00000183724 91 ntBASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp1b1Q99LU0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Gm24158-201ENSMUST00000175263 71 ntBASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp1b1Q99LU0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms