Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS3Q8IXF0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS3Q8IXF0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 MIR346-201ENST00000362234 95 ntBASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 AC069120.2-201ENST00000524091 540 ntBASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPAS3Q8IXF0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AC016027.1-202ENST00000607927 1699 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 HTR7P1-202ENST00000624664 4411 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AC005034.1-201ENST00000426657 489 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 FAM207CP-201ENST00000443486 507 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AC097493.3-201ENST00000509725 367 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AL035252.4-201ENST00000624174 288 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 AC008764.6-201ENST00000595909 2069 ntBASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS3Q8IXF0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 LINC02560-201ENST00000596379 459 ntBASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 AC012645.4-201ENST00000610691 1061 ntBASIC17.47■□□□□ 0.39
NPAS3Q8IXF0 AC008761.3-201ENST00000624803 892 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms