Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AL031432.2-201ENST00000566714 459 ntBASIC20.11■□□□□ 0.81
CTR9Q6PD62 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AL928711.1-201ENST00000570165 459 ntBASIC20.11■□□□□ 0.81
CTR9Q6PD62 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AC091812.2-201ENST00000619081 385 ntBASIC20.11■□□□□ 0.81
CTR9Q6PD62 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 AC092068.3-201ENST00000587894 2016 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.1■□□□□ 0.81
CTR9Q6PD62 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 HMGA1P7-201ENST00000406908 502 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 FAM58CP-201ENST00000435741 640 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.1■□□□□ 0.81
CTR9Q6PD62 AC092902.6-201ENST00000641783 218 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.1■□□□□ 0.81
CTR9Q6PD62 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.1■□□□□ 0.81
CTR9Q6PD62 AL353732.1-201ENST00000569618 1459 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 AC099398.1-201ENST00000567919 2776 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 KRT8P49-201ENST00000604166 1432 ntBASIC20.1■□□□□ 0.81
CTR9Q6PD62 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTR9Q6PD62 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 AC004967.1-201ENST00000453589 447 ntBASIC20.09■□□□□ 0.81
CTR9Q6PD62 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 ELL2P1-201ENST00000413990 1906 ntBASIC20.09■□□□□ 0.81
CTR9Q6PD62 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.09■□□□□ 0.81
CTR9Q6PD62 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTR9Q6PD62 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 OR6D1P-202ENST00000641007 5290 ntBASIC20.08■□□□□ 0.81
CTR9Q6PD62 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AC012313.1-201ENST00000593393 3059 ntBASIC20.08■□□□□ 0.81
CTR9Q6PD62 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AC211486.1-202ENST00000416371 468 ntBASIC20.08■□□□□ 0.81
CTR9Q6PD62 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AC211476.1-201ENST00000503899 468 ntBASIC20.08■□□□□ 0.81
CTR9Q6PD62 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.08■□□□□ 0.81
CTR9Q6PD62 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTR9Q6PD62 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CTR9Q6PD62 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
CTR9Q6PD62 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTR9Q6PD62 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTR9Q6PD62 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTR9Q6PD62 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTR9Q6PD62 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms