Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 RBM17P3-201ENST00000417687 1192 ntBASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 DDX43P3-201ENST00000441064 443 ntBASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 AL591424.1-201ENST00000442569 1213 ntBASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 FAM197Y3-203ENST00000618346 717 ntBASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 RPS8P6-201ENST00000426177 609 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 DNAJB3-201ENST00000446806 729 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC010327.4-202ENST00000591484 748 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 MTDHP3-201ENST00000594186 672 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC055717.3-201ENST00000622967 595 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC016396.2-201ENST00000562575 1417 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC104109.2-201ENST00000602919 1418 ntBASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRFAM7AQ494W8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 MST1L-201ENST00000442552 2185 ntBASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRFAM7AQ494W8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms