Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Gm25925-201ENSMUST00000158314 306 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Gm17968-201ENSMUST00000194902 784 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa3Q3UPR0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms