Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC7O00311 AC025062.2-201ENST00000605477 670 ntBASIC16.67■□□□□ 0.26
CDC7O00311 IFNL4P1-201ENST00000607083 540 ntBASIC16.67■□□□□ 0.26
CDC7O00311 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CDC7O00311 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC7O00311 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC7O00311 KRT18P56-201ENST00000507275 550 ntBASIC16.66■□□□□ 0.26
CDC7O00311 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC7O00311 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 AC021087.4-201ENST00000563761 564 ntBASIC16.66■□□□□ 0.26
CDC7O00311 LINC01711-201ENST00000598340 967 ntBASIC16.66■□□□□ 0.26
CDC7O00311 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 AC004706.3-202ENST00000621574 984 ntBASIC16.66■□□□□ 0.26
CDC7O00311 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC7O00311 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CDC7O00311 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC7O00311 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC7O00311 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 KRT8P49-201ENST00000604166 1432 ntBASIC16.65■□□□□ 0.26
CDC7O00311 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.65■□□□□ 0.26
CDC7O00311 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC7O00311 SCARNA2-201ENST00000458748 420 ntBASIC16.65■□□□□ 0.26
CDC7O00311 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 AP002490.2-201ENST00000524791 560 ntBASIC16.65■□□□□ 0.26
CDC7O00311 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC7O00311 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC7O00311 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.65■□□□□ 0.26
CDC7O00311 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDC7O00311 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC7O00311 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CDC7O00311 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC7O00311 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDC7O00311 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CDC7O00311 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC7O00311 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC7O00311 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDC7O00311 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDC7O00311 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC7O00311 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC7O00311 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CDC7O00311 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms