Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 AP005901.3-202ENST00000581653 237 ntBASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 VENTXP7-201ENST00000475503 772 ntBASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 DUX4L17-201ENST00000557360 1267 ntBASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 AC022188.1-201ENST00000620960 1664 ntBASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM49D1C9J1S8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 NUS1P1-201ENST00000446295 882 ntBASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM49D1C9J1S8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms