Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC022211.2-201ENST00000585075 2527 ntBASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA9Q9Y5G4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AL139400.1-201ENST00000366220 510 ntBASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 HLA-J-203ENST00000494367 1087 ntBASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AC025678.2-201ENST00000562061 970 ntBASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AC004449.1-201ENST00000564240 433 ntBASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AL590787.1-201ENST00000568856 1315 ntBASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA9Q9Y5G4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 AC100803.2-201ENST00000562459 1963 ntBASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 AC004461.1-201ENST00000412461 403 ntBASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 FAM185BP-201ENST00000443595 716 ntBASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA9Q9Y5G4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms