Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 AC002558.1-201ENST00000488906 803 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 AL662844.1-201ENST00000546340 181 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 AC109462.3-201ENST00000573934 613 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 AC019129.2-201ENST00000609837 1235 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 TP73-AS1-207ENST00000624167 988 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 AC073592.5-201ENST00000624854 528 ntBASIC16.35■□□□□ 0.21
VMP1Q96GC9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
VMP1Q96GC9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VMP1Q96GC9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 AL049757.1-201ENST00000616842 1596 ntBASIC16.34■□□□□ 0.21
VMP1Q96GC9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PCDHA14-201ENST00000506751 2298 ntBASIC16.34■□□□□ 0.21
VMP1Q96GC9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 FAM197Y8-203ENST00000450145 560 ntBASIC16.34■□□□□ 0.21
VMP1Q96GC9 AF186996.4-201ENST00000467186 377 ntBASIC16.34■□□□□ 0.21
VMP1Q96GC9 AC073648.2-201ENST00000510116 352 ntBASIC16.34■□□□□ 0.21
VMP1Q96GC9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VMP1Q96GC9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VMP1Q96GC9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.33■□□□□ 0.21
VMP1Q96GC9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
VMP1Q96GC9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
VMP1Q96GC9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VMP1Q96GC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.33■□□□□ 0.21
VMP1Q96GC9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VMP1Q96GC9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 MYCLP1-201ENST00000372451 1075 ntBASIC16.33■□□□□ 0.2
VMP1Q96GC9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 AC005104.2-201ENST00000427818 678 ntBASIC16.33■□□□□ 0.2
VMP1Q96GC9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VMP1Q96GC9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.33■□□□□ 0.2
VMP1Q96GC9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms