Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Rom1P32958 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Rom1P32958 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Gm2445-201ENSMUST00000182798 989 ntBASIC11.09□□□□□ -0.63
Rom1P32958 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rom1P32958 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rom1P32958 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rom1P32958 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.09□□□□□ -0.63
Rom1P32958 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rom1P32958 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.63
Rom1P32958 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.08□□□□□ -0.64
Rom1P32958 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.08□□□□□ -0.64
Rom1P32958 Gm12882-201ENSMUST00000121696 517 ntBASIC11.08□□□□□ -0.64
Rom1P32958 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.08□□□□□ -0.64
Rom1P32958 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.08□□□□□ -0.64
Rom1P32958 Gm44608-201ENSMUST00000206827 855 ntBASIC11.08□□□□□ -0.64
Rom1P32958 Gm45167-201ENSMUST00000208007 322 ntBASIC11.08□□□□□ -0.64
Rom1P32958 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.08□□□□□ -0.64
Rom1P32958 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.08□□□□□ -0.64
Rom1P32958 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.08□□□□□ -0.64
Rom1P32958 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rom1P32958 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.07□□□□□ -0.64
Rom1P32958 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.07□□□□□ -0.64
Rom1P32958 Gm5479-201ENSMUST00000160578 435 ntBASIC11.07□□□□□ -0.64
Rom1P32958 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.07□□□□□ -0.64
Rom1P32958 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.07□□□□□ -0.64
Rom1P32958 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Rom1P32958 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms