Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
CD48P09326 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD48P09326 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 AL662844.4-201ENST00000606367 2838 ntBASIC17.6■□□□□ 0.41
CD48P09326 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.6■□□□□ 0.41
CD48P09326 AC079781.3-201ENST00000449110 356 ntBASIC17.6■□□□□ 0.41
CD48P09326 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CD48P09326 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 RNPS1P1-201ENST00000507437 918 ntBASIC17.6■□□□□ 0.41
CD48P09326 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.6■□□□□ 0.41
CD48P09326 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.6■□□□□ 0.41
CD48P09326 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CD48P09326 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CD48P09326 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CD48P09326 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD48P09326 PCDH8P1-201ENST00000428983 2773 ntBASIC17.6■□□□□ 0.41
CD48P09326 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 KRT8P49-201ENST00000604166 1432 ntBASIC17.59■□□□□ 0.41
CD48P09326 AL021920.2-201ENST00000624828 1351 ntBASIC17.59■□□□□ 0.41
CD48P09326 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.59■□□□□ 0.41
CD48P09326 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 AC073621.1-201ENST00000392730 636 ntBASIC17.59■□□□□ 0.41
CD48P09326 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 LAGE3P1-201ENST00000425356 484 ntBASIC17.59■□□□□ 0.41
CD48P09326 KRT18P27-201ENST00000427733 1299 ntBASIC17.59■□□□□ 0.41
CD48P09326 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.59■□□□□ 0.41
CD48P09326 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.59■□□□□ 0.41
CD48P09326 AL121912.1-201ENST00000603683 238 ntBASIC17.59■□□□□ 0.41
CD48P09326 AC148477.8-201ENST00000624298 468 ntBASIC17.59■□□□□ 0.41
CD48P09326 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CD48P09326 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD48P09326 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
CD48P09326 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.58■□□□□ 0.41
CD48P09326 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CD48P09326 PI4KAP1-204ENST00000612579 1703 ntBASIC17.58■□□□□ 0.41
CD48P09326 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CD48P09326 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.58■□□□□ 0.41
CD48P09326 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CD48P09326 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.58■□□□□ 0.41
CD48P09326 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CD48P09326 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.58■□□□□ 0.4
CD48P09326 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms