Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN1P07384 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN1P07384 SCARNA2-201ENST00000458748 420 ntBASIC16.79■□□□□ 0.28
CAPN1P07384 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN1P07384 SLC25A1P1-201ENST00000528351 927 ntBASIC16.79■□□□□ 0.28
CAPN1P07384 SART3-203ENST00000546611 1184 ntBASIC16.79■□□□□ 0.28
CAPN1P07384 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN1P07384 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN1P07384 FAM215A-202ENST00000632077 792 ntBASIC16.79■□□□□ 0.28
CAPN1P07384 AF228730.7-201ENST00000641842 219 ntBASIC16.79■□□□□ 0.28
CAPN1P07384 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN1P07384 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN1P07384 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN1P07384 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CAPN1P07384 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CAPN1P07384 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.78■□□□□ 0.28
CAPN1P07384 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 AC073648.2-201ENST00000510116 352 ntBASIC16.78■□□□□ 0.28
CAPN1P07384 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 AC021087.4-201ENST00000563761 564 ntBASIC16.78■□□□□ 0.28
CAPN1P07384 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPN1P07384 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.78■□□□□ 0.28
CAPN1P07384 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN1P07384 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN1P07384 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CAPN1P07384 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN1P07384 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN1P07384 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN1P07384 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 STK19B-204ENST00000512515 211 ntBASIC16.77■□□□□ 0.28
CAPN1P07384 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN1P07384 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CAPN1P07384 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.77■□□□□ 0.28
CAPN1P07384 AP000867.4-201ENST00000641616 219 ntBASIC16.77■□□□□ 0.28
CAPN1P07384 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms