Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 IGHV3-65-201ENST00000523210 341 ntBASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AC015911.4-201ENST00000588022 1070 ntBASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AC091812.2-201ENST00000619081 385 ntBASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AL589182.2-201ENST00000619332 1049 ntBASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 AC004706.3-202ENST00000621574 984 ntBASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS5Q9UPZ3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 AC067863.1-201ENST00000494933 530 ntBASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 AC010507.1-201ENST00000633895 436 ntBASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 PCDHA12-202ENST00000613593 2588 ntBASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HPS5Q9UPZ3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 AC074386.1-202ENST00000463561 864 ntBASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 AP005018.1-201ENST00000525475 301 ntBASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS5Q9UPZ3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 EGFEM1P-202ENST00000431685 1563 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 BASP1P1-201ENST00000430708 665 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AC022145.2-201ENST00000598203 171 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AC008667.4-201ENST00000607370 168 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 AC092902.6-201ENST00000641783 218 ntBASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS5Q9UPZ3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms