Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AL928711.1-201ENST00000570165 459 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 AC068137.2-201ENST00000605408 478 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 AC092068.3-201ENST00000587894 2016 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 RPSAP43-201ENST00000402237 625 ntBASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 MPDU1-223ENST00000582151 728 ntBASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 AC012569.1-201ENST00000591191 1524 ntBASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCD1Q96GM5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SLC22A20-204ENST00000530038 1673 ntBASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 AL121761.2-201ENST00000598007 1648 ntBASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 C20orf181-201ENST00000623918 480 ntBASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCD1Q96GM5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCD1Q96GM5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 AC087641.1-201ENST00000557561 1021 ntBASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms