Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb3Q91XZ7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Grk6-207ENSMUST00000225925 2769 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm45167-201ENSMUST00000208007 322 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb3Q91XZ7 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Mir8117-201ENSMUST00000184773 107 ntBASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb3Q91XZ7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms