Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gm5161-201ENSMUST00000075243 853 ntBASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm18056-201ENSMUST00000207670 568 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm18061-201ENSMUST00000208350 562 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm18063-201ENSMUST00000208529 568 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm18052-201ENSMUST00000208750 559 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna5Q2MKA5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm29608-201ENSMUST00000190444 463 ntBASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm37008-201ENSMUST00000195712 319 ntBASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm43118-201ENSMUST00000199149 775 ntBASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chrna5Q2MKA5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna5Q2MKA5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chrna5Q2MKA5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms