Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 AC106820.2-201ENST00000563775 3264 ntBASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 HCG4-201ENST00000418983 998 ntBASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 UGT1A2P-201ENST00000454886 866 ntBASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 AC091167.2-201ENST00000579581 588 ntBASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 MIR4492-201ENST00000581627 80 ntBASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHROOM1Q2M3G4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 WASH6P-202ENST00000359512 1437 ntBASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 AC093214.1-201ENST00000511688 1107 ntBASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 AC069262.1-201ENST00000539058 672 ntBASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 AC087641.1-201ENST00000557561 1021 ntBASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 TUBB3P1-201ENST00000405796 1332 ntBASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHROOM1Q2M3G4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 FO538757.1-201ENST00000623083 1397 ntBASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 AC092068.3-201ENST00000587894 2016 ntBASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 AL512356.2-201ENST00000546955 174 ntBASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHROOM1Q2M3G4 CYP2A7P1-201ENST00000595391 815 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms