Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC3P40938 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC3P40938 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC3P40938 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFC3P40938 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 AC133963.1-201ENST00000504166 1679 ntBASIC15.6■□□□□ 0.09
RFC3P40938 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC3P40938 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC3P40938 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC3P40938 DNAJB3-202ENST00000449667 1266 ntBASIC15.6■□□□□ 0.09
RFC3P40938 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC3P40938 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.6■□□□□ 0.09
RFC3P40938 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 AC096734.2-201ENST00000562054 433 ntBASIC15.6■□□□□ 0.09
RFC3P40938 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RFC3P40938 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RFC3P40938 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RFC3P40938 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RFC3P40938 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC3P40938 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.59■□□□□ 0.09
RFC3P40938 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 HTR5BP-201ENST00000430851 1154 ntBASIC15.59■□□□□ 0.09
RFC3P40938 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.59■□□□□ 0.09
RFC3P40938 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 CXCL1P1-201ENST00000502804 216 ntBASIC15.59■□□□□ 0.09
RFC3P40938 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
RFC3P40938 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.59■□□□□ 0.09
RFC3P40938 PDPK2P-202ENST00000562415 1191 ntBASIC15.59■□□□□ 0.09
RFC3P40938 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.59■□□□□ 0.09
RFC3P40938 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RFC3P40938 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RFC3P40938 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
RFC3P40938 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RFC3P40938 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
RFC3P40938 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
RFC3P40938 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RFC3P40938 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.59■□□□□ 0.09
RFC3P40938 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RFC3P40938 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RFC3P40938 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.58■□□□□ 0.09
RFC3P40938 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.58■□□□□ 0.09
RFC3P40938 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RFC3P40938 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.58■□□□□ 0.08
RFC3P40938 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
RFC3P40938 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms