Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXC8P31273 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.38■□□□□ 0.53
HOXC8P31273 AC241585.1-201ENST00000433527 519 ntBASIC18.38■□□□□ 0.53
HOXC8P31273 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXC8P31273 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXC8P31273 AC073592.8-201ENST00000624126 511 ntBASIC18.38■□□□□ 0.53
HOXC8P31273 NOC2LP2-201ENST00000407594 1944 ntBASIC18.38■□□□□ 0.53
HOXC8P31273 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC8P31273 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXC8P31273 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
HOXC8P31273 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC8P31273 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.37■□□□□ 0.53
HOXC8P31273 PRYP6-201ENST00000514804 343 ntBASIC18.37■□□□□ 0.53
HOXC8P31273 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 SPDYE12P-201ENST00000618416 771 ntBASIC18.37■□□□□ 0.53
HOXC8P31273 AL590560.3-201ENST00000623350 461 ntBASIC18.37■□□□□ 0.53
HOXC8P31273 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC8P31273 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 AC100757.3-201ENST00000622361 1406 ntBASIC18.37■□□□□ 0.53
HOXC8P31273 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 AC092053.1-201ENST00000605787 1936 ntBASIC18.37■□□□□ 0.53
HOXC8P31273 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC8P31273 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HOXC8P31273 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC8P31273 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC8P31273 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 FAM220BP-201ENST00000377689 816 ntBASIC18.36■□□□□ 0.53
HOXC8P31273 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXC8P31273 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXC8P31273 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC8P31273 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC8P31273 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.36■□□□□ 0.53
HOXC8P31273 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC8P31273 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms