Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX6Q9UPM6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 MTND2P9-201ENST00000422293 931 ntBASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC096633.1-201ENST00000422446 749 ntBASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC010460.3-201ENST00000511359 1579 ntBASIC16.16■□□□□ 0.18
LHX6Q9UPM6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX6Q9UPM6 AC104581.1-202ENST00000635932 2618 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SPDYE7P-202ENST00000420373 878 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ACA64.2-201ENST00000459014 129 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC079140.1-201ENST00000508039 487 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC008677.1-201ENST00000519230 1561 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AC020916.1-201ENST00000587762 1774 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms