Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC138969.3-201ENST00000546612 1459 ntBASIC17.07■□□□□ 0.32
SHDQ96IW2 AC138932.2-201ENST00000548268 1459 ntBASIC17.07■□□□□ 0.32
SHDQ96IW2 AC126755.4-201ENST00000549796 1459 ntBASIC17.07■□□□□ 0.32
SHDQ96IW2 AC007541.1-201ENST00000570282 1469 ntBASIC17.07■□□□□ 0.32
SHDQ96IW2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
SHDQ96IW2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 AC087499.5-201ENST00000452760 1342 ntBASIC17.07■□□□□ 0.32
SHDQ96IW2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.07■□□□□ 0.32
SHDQ96IW2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.07■□□□□ 0.32
SHDQ96IW2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.07■□□□□ 0.32
SHDQ96IW2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.07■□□□□ 0.32
SHDQ96IW2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.07■□□□□ 0.32
SHDQ96IW2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
SHDQ96IW2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHDQ96IW2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.07■□□□□ 0.32
SHDQ96IW2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.06■□□□□ 0.32
SHDQ96IW2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHDQ96IW2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
SHDQ96IW2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SHDQ96IW2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 HLA-H-201ENST00000383620 1096 ntBASIC17.06■□□□□ 0.32
SHDQ96IW2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 U91328.1-201ENST00000437528 223 ntBASIC17.06■□□□□ 0.32
SHDQ96IW2 AC009477.1-201ENST00000452936 217 ntBASIC17.06■□□□□ 0.32
SHDQ96IW2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
SHDQ96IW2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.06■□□□□ 0.32
SHDQ96IW2 AC073389.1-201ENST00000595595 795 ntBASIC17.06■□□□□ 0.32
SHDQ96IW2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 SLC22A20-204ENST00000530038 1673 ntBASIC17.06■□□□□ 0.32
SHDQ96IW2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHDQ96IW2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHDQ96IW2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 CETN4P-206ENST00000642099 2168 ntBASIC17.05■□□□□ 0.32
SHDQ96IW2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHDQ96IW2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 LYSMD4-203ENST00000378904 2122 ntBASIC17.05■□□□□ 0.32
SHDQ96IW2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SHDQ96IW2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.05■□□□□ 0.32
SHDQ96IW2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.05■□□□□ 0.32
SHDQ96IW2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 AL132655.2-201ENST00000596276 594 ntBASIC17.05■□□□□ 0.32
SHDQ96IW2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.05■□□□□ 0.32
SHDQ96IW2 AC020763.4-201ENST00000623414 4170 ntBASIC17.05■□□□□ 0.32
SHDQ96IW2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHDQ96IW2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHDQ96IW2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.05■□□□□ 0.32
SHDQ96IW2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
SHDQ96IW2 AC131009.4-201ENST00000624048 1740 ntBASIC17.04■□□□□ 0.32
SHDQ96IW2 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.04■□□□□ 0.32
SHDQ96IW2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SHDQ96IW2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.04■□□□□ 0.32
SHDQ96IW2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 AC087499.6-201ENST00000411576 835 ntBASIC17.04■□□□□ 0.32
SHDQ96IW2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.04■□□□□ 0.32
SHDQ96IW2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.04■□□□□ 0.32
SHDQ96IW2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHDQ96IW2 GIMAP3P-201ENST00000495150 836 ntBASIC17.04■□□□□ 0.32
SHDQ96IW2 AC011495.1-201ENST00000498085 584 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms