Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF31Q96EP0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF31Q96EP0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 DDX43P3-201ENST00000441064 443 ntBASIC16.48■□□□□ 0.23
RNF31Q96EP0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 AC010507.1-201ENST00000633895 436 ntBASIC16.48■□□□□ 0.23
RNF31Q96EP0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF31Q96EP0 PI4KAP1-204ENST00000612579 1703 ntBASIC16.48■□□□□ 0.23
RNF31Q96EP0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF31Q96EP0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 FLJ13224-201ENST00000313737 1514 ntBASIC16.47■□□□□ 0.23
RNF31Q96EP0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF31Q96EP0 AC004832.2-201ENST00000426397 482 ntBASIC16.47■□□□□ 0.23
RNF31Q96EP0 HCG4B-203ENST00000450128 991 ntBASIC16.47■□□□□ 0.23
RNF31Q96EP0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
RNF31Q96EP0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 MIR4469-201ENST00000583919 79 ntBASIC16.47■□□□□ 0.23
RNF31Q96EP0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF31Q96EP0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms