Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 AL021920.2-201ENST00000624828 1351 ntBASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 MIR4515-201ENST00000584082 81 ntBASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 AL645728.2-201ENST00000641974 660 ntBASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF39Q8N4T4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 HTR7P1-202ENST00000624664 4411 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 AL121761.2-201ENST00000598007 1648 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 TUBB7P-202ENST00000428444 1305 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 RPSAP43-201ENST00000402237 625 ntBASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.02■□□□□ 0.16
ARHGEF39Q8N4T4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.02■□□□□ 0.15
ARHGEF39Q8N4T4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 HMGA1P7-201ENST00000406908 502 ntBASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 GPX1P2-201ENST00000429271 606 ntBASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 AC074386.1-202ENST00000463561 864 ntBASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 MTDHP5-201ENST00000598980 586 ntBASIC16.01■□□□□ 0.15
ARHGEF39Q8N4T4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms