Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB1Q86U70 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LDB1Q86U70 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.03■□□□□ 0.32
LDB1Q86U70 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.03■□□□□ 0.32
LDB1Q86U70 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC025062.2-201ENST00000605477 670 ntBASIC17.03■□□□□ 0.32
LDB1Q86U70 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB1Q86U70 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.03■□□□□ 0.32
LDB1Q86U70 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LDB1Q86U70 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDB1Q86U70 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB1Q86U70 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LDB1Q86U70 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
LDB1Q86U70 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.02■□□□□ 0.32
LDB1Q86U70 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.02■□□□□ 0.32
LDB1Q86U70 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB1Q86U70 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LDB1Q86U70 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LDB1Q86U70 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LDB1Q86U70 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.02■□□□□ 0.32
LDB1Q86U70 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB1Q86U70 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.02■□□□□ 0.32
LDB1Q86U70 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.02■□□□□ 0.32
LDB1Q86U70 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LDB1Q86U70 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LDB1Q86U70 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB1Q86U70 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
LDB1Q86U70 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDB1Q86U70 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LDB1Q86U70 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LDB1Q86U70 AC124067.4-201ENST00000519691 2379 ntBASIC17.02■□□□□ 0.31
LDB1Q86U70 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.02■□□□□ 0.31
LDB1Q86U70 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LDB1Q86U70 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LDB1Q86U70 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDB1Q86U70 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LDB1Q86U70 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
LDB1Q86U70 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LDB1Q86U70 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
LDB1Q86U70 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LDB1Q86U70 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.01■□□□□ 0.31
LDB1Q86U70 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.01■□□□□ 0.31
LDB1Q86U70 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.01■□□□□ 0.31
LDB1Q86U70 SCARNA2-201ENST00000458748 420 ntBASIC17.01■□□□□ 0.31
LDB1Q86U70 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.01■□□□□ 0.31
LDB1Q86U70 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.01■□□□□ 0.31
LDB1Q86U70 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 TP73-AS1-207ENST00000624167 988 ntBASIC17.01■□□□□ 0.31
LDB1Q86U70 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LDB1Q86U70 AC243591.1-201ENST00000452967 1364 ntBASIC17.01■□□□□ 0.31
LDB1Q86U70 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LDB1Q86U70 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms