Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF20Q5VTR2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 TERC-201ENST00000602385 541 ntBASIC20.35■□□□□ 0.85
RNF20Q5VTR2 AC004706.3-202ENST00000621574 984 ntBASIC20.35■□□□□ 0.85
RNF20Q5VTR2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF20Q5VTR2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 PCDHB17P-201ENST00000539533 2393 ntBASIC20.34■□□□□ 0.85
RNF20Q5VTR2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 DUX4L17-201ENST00000557360 1267 ntBASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AC021087.4-201ENST00000563761 564 ntBASIC20.34■□□□□ 0.85
RNF20Q5VTR2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.34■□□□□ 0.85
RNF20Q5VTR2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AC025062.2-201ENST00000605477 670 ntBASIC20.34■□□□□ 0.85
RNF20Q5VTR2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RNF20Q5VTR2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 LAGE3P1-201ENST00000425356 484 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms