Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.73□□□□□ -0.53
Abca1P41233 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Abca1P41233 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.73□□□□□ -0.53
Abca1P41233 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.73□□□□□ -0.53
Abca1P41233 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.73□□□□□ -0.53
Abca1P41233 Gm9002-201ENSMUST00000178437 499 ntBASIC11.73□□□□□ -0.53
Abca1P41233 Gm46209-201ENSMUST00000217912 553 ntBASIC11.73□□□□□ -0.53
Abca1P41233 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.73□□□□□ -0.53
Abca1P41233 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Abca1P41233 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.73□□□□□ -0.53
Abca1P41233 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Abca1P41233 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Abca1P41233 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.73□□□□□ -0.53
Abca1P41233 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Celf4-206ENSMUST00000224553 1729 ntBASIC11.73□□□□□ -0.53
Abca1P41233 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Abca1P41233 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Abca1P41233 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.72□□□□□ -0.53
Abca1P41233 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.72□□□□□ -0.53
Abca1P41233 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Gm33320-201ENSMUST00000192232 530 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Gm2451-201ENSMUST00000199447 999 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Gm10290-201ENSMUST00000200451 999 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Abca1P41233 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Abca1P41233 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Abca1P41233 Mir1247-201ENSMUST00000116706 82 ntBASIC11.72□□□□□ -0.53
Abca1P41233 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.72□□□□□ -0.53
Abca1P41233 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Abca1P41233 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Abca1P41233 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.72□□□□□ -0.53
Abca1P41233 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Abca1P41233 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Abca1P41233 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.71□□□□□ -0.53
Abca1P41233 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Abca1P41233 Gm5354-201ENSMUST00000182417 973 ntBASIC11.71□□□□□ -0.53
Abca1P41233 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.71□□□□□ -0.53
Abca1P41233 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.71□□□□□ -0.53
Abca1P41233 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Abca1P41233 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.71□□□□□ -0.54
Abca1P41233 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms