Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDE6BP35913 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
PDE6BP35913 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDE6BP35913 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.81■□□□□ 0.92
PDE6BP35913 AL353779.1-201ENST00000434793 351 ntBASIC20.81■□□□□ 0.92
PDE6BP35913 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE6BP35913 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 AC009407.1-201ENST00000568958 598 ntBASIC20.81■□□□□ 0.92
PDE6BP35913 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDE6BP35913 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.81■□□□□ 0.92
PDE6BP35913 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 AC007541.1-201ENST00000570282 1469 ntBASIC20.81■□□□□ 0.92
PDE6BP35913 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.8■□□□□ 0.92
PDE6BP35913 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
PDE6BP35913 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 HLA-H-201ENST00000383620 1096 ntBASIC20.8■□□□□ 0.92
PDE6BP35913 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDE6BP35913 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.8■□□□□ 0.92
PDE6BP35913 GPR53P-205ENST00000457298 1084 ntBASIC20.8■□□□□ 0.92
PDE6BP35913 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDE6BP35913 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6BP35913 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6BP35913 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6BP35913 BX323043.1-201ENST00000641006 1765 ntBASIC20.8■□□□□ 0.92
PDE6BP35913 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.79■□□□□ 0.92
PDE6BP35913 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 BCL2-203ENST00000589955 5011 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PDE6BP35913 AL353705.2-201ENST00000428243 662 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.79■□□□□ 0.92
PDE6BP35913 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
PDE6BP35913 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.79■□□□□ 0.92
PDE6BP35913 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 CYP2A7P1-201ENST00000595391 815 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 AL132655.2-201ENST00000596276 594 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 AC008738.7-201ENST00000609744 511 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 TEX28P1-201ENST00000613479 1221 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 TEX28P2-201ENST00000617764 1221 ntBASIC20.79■□□□□ 0.92
PDE6BP35913 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDE6BP35913 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDE6BP35913 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6BP35913 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDE6BP35913 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6BP35913 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms