Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 AC012313.1-201ENST00000593393 3059 ntBASIC16.51■□□□□ 0.23
LAMA1P25391 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LAMA1P25391 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LAMA1P25391 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 AL512638.1-201ENST00000457493 794 ntBASIC16.5■□□□□ 0.23
LAMA1P25391 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.5■□□□□ 0.23
LAMA1P25391 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.5■□□□□ 0.23
LAMA1P25391 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.5■□□□□ 0.23
LAMA1P25391 AL031055.1-201ENST00000606362 631 ntBASIC16.5■□□□□ 0.23
LAMA1P25391 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.5■□□□□ 0.23
LAMA1P25391 AL590560.3-201ENST00000623350 461 ntBASIC16.5■□□□□ 0.23
LAMA1P25391 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
LAMA1P25391 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.5■□□□□ 0.23
LAMA1P25391 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.5■□□□□ 0.23
LAMA1P25391 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LAMA1P25391 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.5■□□□□ 0.23
LAMA1P25391 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LAMA1P25391 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LAMA1P25391 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.5■□□□□ 0.23
LAMA1P25391 AC090164.3-201ENST00000610780 2143 ntBASIC16.5■□□□□ 0.23
LAMA1P25391 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LAMA1P25391 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.49■□□□□ 0.23
LAMA1P25391 HCG4-201ENST00000418983 998 ntBASIC16.49■□□□□ 0.23
LAMA1P25391 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
LAMA1P25391 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.49■□□□□ 0.23
LAMA1P25391 AC027307.2-201ENST00000591252 911 ntBASIC16.49■□□□□ 0.23
LAMA1P25391 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
LAMA1P25391 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.49■□□□□ 0.23
LAMA1P25391 AC067852.2-201ENST00000590513 2313 ntBASIC16.49■□□□□ 0.23
LAMA1P25391 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.49■□□□□ 0.23
LAMA1P25391 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LAMA1P25391 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
LAMA1P25391 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.49■□□□□ 0.23
LAMA1P25391 TP53TG3HP-202ENST00000569755 579 ntBASIC16.49■□□□□ 0.23
LAMA1P25391 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LAMA1P25391 AC092068.3-201ENST00000587894 2016 ntBASIC16.49■□□□□ 0.23
LAMA1P25391 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms