Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3aO08759 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Gm16198-201ENSMUST00000118766 670 ntBASIC15.26■□□□□ 0.03
Ube3aO08759 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.26■□□□□ 0.03
Ube3aO08759 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Gm5479-201ENSMUST00000160578 435 ntBASIC15.26■□□□□ 0.03
Ube3aO08759 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.26■□□□□ 0.03
Ube3aO08759 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ube3aO08759 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3aO08759 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Ube3aO08759 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ube3aO08759 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Gm8000-201ENSMUST00000188378 592 ntBASIC15.25■□□□□ 0.03
Ube3aO08759 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube3aO08759 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.25■□□□□ 0.03
Ube3aO08759 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Gm5867-201ENSMUST00000063197 592 ntBASIC15.25■□□□□ 0.03
Ube3aO08759 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube3aO08759 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube3aO08759 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ube3aO08759 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3aO08759 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube3aO08759 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Gm13597-201ENSMUST00000121239 375 ntBASIC15.24■□□□□ 0.03
Ube3aO08759 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.24■□□□□ 0.03
Ube3aO08759 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube3aO08759 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.24■□□□□ 0.03
Ube3aO08759 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ube3aO08759 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3aO08759 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ube3aO08759 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3aO08759 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3aO08759 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3aO08759 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms