Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SMSP52788 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMSP52788 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
SMSP52788 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
SMSP52788 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMSP52788 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SMSP52788 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.06■□□□□ 0.16
SMSP52788 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.06■□□□□ 0.16
SMSP52788 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 FGFR3P6-201ENST00000457012 610 ntBASIC16.06■□□□□ 0.16
SMSP52788 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.06■□□□□ 0.16
SMSP52788 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.06■□□□□ 0.16
SMSP52788 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.06■□□□□ 0.16
SMSP52788 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.06■□□□□ 0.16
SMSP52788 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.06■□□□□ 0.16
SMSP52788 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.06■□□□□ 0.16
SMSP52788 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
SMSP52788 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
SMSP52788 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMSP52788 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 AC106886.4-201ENST00000623557 2502 ntBASIC16.05■□□□□ 0.16
SMSP52788 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.05■□□□□ 0.16
SMSP52788 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.05■□□□□ 0.16
SMSP52788 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.05■□□□□ 0.16
SMSP52788 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.05■□□□□ 0.16
SMSP52788 AC092183.1-201ENST00000469884 875 ntBASIC16.05■□□□□ 0.16
SMSP52788 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.05■□□□□ 0.16
SMSP52788 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.05■□□□□ 0.16
SMSP52788 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.05■□□□□ 0.16
SMSP52788 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.05■□□□□ 0.16
SMSP52788 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 MIR7706-201ENST00000613747 67 ntBASIC16.05■□□□□ 0.16
SMSP52788 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.05■□□□□ 0.16
SMSP52788 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.05■□□□□ 0.16
SMSP52788 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMSP52788 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms