Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PTP4A3O75365 LINC00265-3P-201ENST00000447588 903 ntBASIC15.43■□□□□ 0.06
PTP4A3O75365 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.43■□□□□ 0.06
PTP4A3O75365 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.43■□□□□ 0.06
PTP4A3O75365 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.43■□□□□ 0.06
PTP4A3O75365 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTP4A3O75365 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.43■□□□□ 0.06
PTP4A3O75365 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 AC006449.5-201ENST00000610658 2098 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PTP4A3O75365 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.42■□□□□ 0.06
PTP4A3O75365 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.42■□□□□ 0.06
PTP4A3O75365 ABCD1P5-201ENST00000445663 754 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.42■□□□□ 0.06
PTP4A3O75365 AC074051.2-201ENST00000565115 352 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A3O75365 MIR5100-201ENST00000579544 119 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 AC092329.2-201ENST00000598402 547 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A3O75365 AC073592.4-201ENST00000623827 446 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 AC097637.2-201ENST00000624096 1997 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A3O75365 HLA-A-202ENST00000376806 1854 ntBASIC15.42■□□□□ 0.06
PTP4A3O75365 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A3O75365 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A3O75365 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A3O75365 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A3O75365 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 DOC2GP-204ENST00000639052 2548 ntBASIC15.41■□□□□ 0.06
PTP4A3O75365 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A3O75365 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A3O75365 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PTP4A3O75365 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 AP002414.1-201ENST00000391405 1147 ntBASIC15.41■□□□□ 0.06
PTP4A3O75365 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.41■□□□□ 0.06
PTP4A3O75365 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PTP4A3O75365 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.41■□□□□ 0.06
PTP4A3O75365 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 AL590326.2-201ENST00000625139 305 ntBASIC15.41■□□□□ 0.06
PTP4A3O75365 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms