Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmgn3Q9DCB1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hmgn3Q9DCB1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm17807-201ENSMUST00000186869 298 ntBASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn3Q9DCB1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm8097-201ENSMUST00000117903 829 ntBASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn3Q9DCB1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms