Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 AC092053.1-201ENST00000605787 1936 ntBASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC50Q8IVM0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC50Q8IVM0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
CCDC50Q8IVM0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC50Q8IVM0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CCDC50Q8IVM0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 AC103564.2-201ENST00000432853 1299 ntBASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 VENTXP7-201ENST00000475503 772 ntBASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 AL353801.3-201ENST00000609898 542 ntBASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC50Q8IVM0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 SLC25A1P3-201ENST00000395415 828 ntBASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 BX276092.5-203ENST00000456199 560 ntBASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 KRT8P10-201ENST00000450021 1447 ntBASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 AL049757.1-201ENST00000616842 1596 ntBASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC50Q8IVM0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms