Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trerf1Q8BXJ2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trerf1Q8BXJ2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Gm18889-201ENSMUST00000174284 929 ntBASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trerf1Q8BXJ2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms