Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHB4P54760 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 OR7E47P-204ENST00000575924 449 ntBASIC19.26■□□□□ 0.67
EPHB4P54760 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHB4P54760 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHB4P54760 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 AC105339.1-204ENST00000636249 355 ntBASIC19.26■□□□□ 0.67
EPHB4P54760 AC092902.6-201ENST00000641783 218 ntBASIC19.26■□□□□ 0.67
EPHB4P54760 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
EPHB4P54760 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EPHB4P54760 AC141586.5-201ENST00000624546 2050 ntBASIC19.26■□□□□ 0.67
EPHB4P54760 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB4P54760 AC025580.3-201ENST00000617932 1424 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EPHB4P54760 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHB4P54760 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHB4P54760 RHOQP3-201ENST00000437982 621 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 ACTG1P14-201ENST00000446382 1122 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHB4P54760 AC069262.1-201ENST00000539058 672 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHB4P54760 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHB4P54760 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHB4P54760 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EPHB4P54760 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHB4P54760 AC010654.1-201ENST00000615722 808 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 AL035252.4-201ENST00000624174 288 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB4P54760 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB4P54760 AC132938.5-201ENST00000624980 1813 ntBASIC19.25■□□□□ 0.67
EPHB4P54760 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB4P54760 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB4P54760 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
EPHB4P54760 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EPHB4P54760 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHB4P54760 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 AC015922.1-201ENST00000421102 1152 ntBASIC19.24■□□□□ 0.67
EPHB4P54760 AC005034.1-201ENST00000426657 489 ntBASIC19.24■□□□□ 0.67
EPHB4P54760 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHB4P54760 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHB4P54760 AC074386.1-202ENST00000463561 864 ntBASIC19.24■□□□□ 0.67
EPHB4P54760 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHB4P54760 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EPHB4P54760 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB4P54760 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms