Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.44■□□□□ 0.06
PPP3CBP16298 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.44■□□□□ 0.06
PPP3CBP16298 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PPP3CBP16298 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
PPP3CBP16298 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
PPP3CBP16298 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 LAGE3P1-201ENST00000425356 484 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 PRYP5-201ENST00000451909 266 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.43■□□□□ 0.06
PPP3CBP16298 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.43■□□□□ 0.06
PPP3CBP16298 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.43■□□□□ 0.06
PPP3CBP16298 AC106730.1-201ENST00000566722 1090 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.43■□□□□ 0.06
PPP3CBP16298 MTDHP4-201ENST00000600287 670 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.43■□□□□ 0.06
PPP3CBP16298 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PPP3CBP16298 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PPP3CBP16298 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 AC010460.3-201ENST00000511359 1579 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PPP3CBP16298 AP001094.4-201ENST00000579008 2176 ntBASIC15.43■□□□□ 0.06
PPP3CBP16298 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP3CBP16298 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PPP3CBP16298 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PPP3CBP16298 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PPP3CBP16298 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PPP3CBP16298 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 AC243591.1-201ENST00000452967 1364 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.42■□□□□ 0.06
PPP3CBP16298 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.42■□□□□ 0.06
PPP3CBP16298 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 RPS2P1-201ENST00000434010 821 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 HNRNPDP1-201ENST00000439535 754 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.42■□□□□ 0.06
PPP3CBP16298 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.42■□□□□ 0.06
PPP3CBP16298 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.42■□□□□ 0.06
PPP3CBP16298 AC025062.2-201ENST00000605477 670 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 AC008735.5-201ENST00000623544 497 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 AC107918.4-202ENST00000641623 219 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
PPP3CBP16298 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP3CBP16298 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP3CBP16298 SIGLEC16-201ENST00000599858 1437 ntBASIC15.42■□□□□ 0.06
PPP3CBP16298 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
PPP3CBP16298 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP3CBP16298 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP3CBP16298 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP3CBP16298 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP3CBP16298 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP3CBP16298 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP3CBP16298 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP3CBP16298 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP3CBP16298 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms