Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PHF1O43189 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 AC133963.1-201ENST00000504166 1679 ntBASIC14.87□□□□□ -0.03
PHF1O43189 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.87□□□□□ -0.03
PHF1O43189 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
PHF1O43189 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 AL049840.3-201ENST00000602669 611 ntBASIC14.87□□□□□ -0.03
PHF1O43189 MIR7706-201ENST00000613747 67 ntBASIC14.87□□□□□ -0.03
PHF1O43189 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.87□□□□□ -0.03
PHF1O43189 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.87□□□□□ -0.03
PHF1O43189 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PHF1O43189 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PHF1O43189 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PHF1O43189 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PHF1O43189 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.86□□□□□ -0.03
PHF1O43189 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.86□□□□□ -0.03
PHF1O43189 AL591684.3-201ENST00000605187 298 ntBASIC14.86□□□□□ -0.03
PHF1O43189 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.86□□□□□ -0.03
PHF1O43189 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.86□□□□□ -0.03
PHF1O43189 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PHF1O43189 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PHF1O43189 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.85□□□□□ -0.03
PHF1O43189 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.85□□□□□ -0.03
PHF1O43189 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.85□□□□□ -0.03
PHF1O43189 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHF1O43189 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHF1O43189 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHF1O43189 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHF1O43189 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PHF1O43189 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.85□□□□□ -0.03
PHF1O43189 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 TP73-AS1-210ENST00000637775 1455 ntBASIC14.85□□□□□ -0.03
PHF1O43189 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.85□□□□□ -0.03
PHF1O43189 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms