Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
CDH9Q9ULB4 AC025580.3-201ENST00000617932 1424 ntBASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 AL513480.1-201ENST00000451731 511 ntBASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 AC124947.2-201ENST00000547118 1133 ntBASIC18.06■□□□□ 0.48
CDH9Q9ULB4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PDPK2P-202ENST00000562415 1191 ntBASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH9Q9ULB4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 UPF3AP3-201ENST00000420996 769 ntBASIC18.05■□□□□ 0.48
CDH9Q9ULB4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 DUX4L17-201ENST00000557360 1267 ntBASIC18.05■□□□□ 0.48
CDH9Q9ULB4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDH9Q9ULB4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 GPX1P2-201ENST00000429271 606 ntBASIC18.04■□□□□ 0.48
CDH9Q9ULB4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms